seanlaidlaw Goto Github PK

anki-quickadd

A graphical pop-up that allows rapid adding of notes to Anki from anywhere without having to alt-tab away from what youre doing.

barman

R package to make your G&T (plots). Pre-processes and plots single-cell DNA and RNA data from G&T-seq.

better-bjobs

curses based wrapper script for LSF BJOBS command to improve on design and increase usefulness

better-bjobs-go

bettercoin

Web developpment class project to emulate what a classfied ads website would look like

biopythonprojet

borrowbox-scraper

Python script to hands-free download all audiobooks on loan from library BorrowBox account.

ebi-bioinformatics-course-scaling_things_up

Scripts from the "Scaling things up" talk I gave at the EBI NGS Bioinformatics course in Sept 2019 and Feb 2021.

ebi-introduction-to-github

Course material for the EMBL-EBI Introduction to Bioinformatics course

encryptedcontactnotes

Applescript to allow easy adding and editing of encrypted notes to the Apple Contacts.app, using gpg symmetric encryption (AES 256). If using the "save password for session" option, a GPG Key ID will need to be specified at the top of the script which will be used to encrypt the passphrase to be remembered.

expand-ealias.plugin.zsh

expand specific aliases with space

factyou

Machine learning driven bibliography parser for finding the source for things you know.

fancybar

Ubersicht bar for use with chunkwm

farm-tools

A collection of scripts for use on Sanger HPC to manage downloading, relaligning, and pre-processing

ffhqfacealignment

Fork of chi0tzp's Face alignment tool for transforming face images into FFHQ-style

genomecampus-bus-reserver

Scripts to automate the booking of Campus Bus for the Wellcome Genome Campus

gpt2-app

A Flask Web App for Generating Text with GPT-2

gru-mo

Grouped Read Unifier and Mapping Optimiser, a prototype pseudoaligner, that unifies reads by shared common transcripts, and quantifies read abundance.

horizonsynth-rstudio-theme

hugo-theme-stack

Card-style Hugo theme designed for bloggers

instapaper-bulk-delete

irods-downloader

Wrapper program for hassle-free downloading and realigning of sequencing data from iRODS on a cluster

itunes-metatools

land-use-tensorflow-project

A tensorflow project to analyse land use in the Dordogne region over time.

maildir2gmail

Work email to Gmail, downloads email from IMAP server and reuploads to GMAIL using maildir2gmail

metallaxis

A Python GUI VCF viewer for SNP, indels, and TE.

omnifocus-habitica-link

Scripts to allow a transfer of tasks from Omnifocus to Habitica.

omnifocus-task-share

projet-outilbioinfo

qmk_ergodox_layout

My custom layout for flashing onto the QMK based Ergodox keyboard. The base layout was Canadian Multilingual.