Comments (2)
Hi. Could you please check what version of pandas are you using? SyRI works with pandas version 0.23.4 and the newer versions of pandas are known to result in such errors.
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Hi. Could you please check what version of pandas are you using? SyRI works with pandas version 0.23.4 and the newer versions of pandas are known to result in such errors.
Thanks,the pandas version I used is 0.24.2. I will try using 0.23.4.
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Related Issues (20)
- ERROR - No syntenic region found for chromosome: chr15. This is potentially caused by the two assemblies having different strands for this chromosomes. Reverse complement the chromosome to ensure that the same strands are analysed. Exiting HOT 1
- Syri doesn't deal with unequal chromosome comparison HOT 2
- IndexError: list index out of range(direction) HOT 6
- chroder input format requirements HOT 2
- ImportError: libicui18n.so.56: cannot open shared object file: No such file or directory HOT 2
- Sequence length calculation error HOT 6
- translocation ascross chromosomes HOT 1
- Can't install on Ubuntu 22.04 HOT 2
- How to cite chroder? HOT 1
- error running syri: IndexError: list index out of range HOT 2
- How to identify breakpoint of large inversion HOT 3
- Aligning bacterial genomes with different number of contigs HOT 2
- longer processing time for large genome? HOT 1
- nearly identical HDRs HOT 3
- How long does it take to generate the result file? HOT 3
- conda installation HOT 2
- Removes 'low-quality alignments' - what does this mean? HOT 1
- complicated region not detected correctly HOT 2
- About InvOut and Inv breakpoints HOT 3
- Huge chromosome problem HOT 6
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