Related Issues (20)
- MetabolicReaction should include complex.id
- Model dictlist attributes should only include process_data HOT 1
- processdata.py met does not have formula HOT 1
- Acetate production prediction HOT 1
- Specify metabolite compartments in JSON HOT 1
- Remove <metabolite>.mass handling HOT 1
- Add docker script HOT 1
- [subreaction].enzyme should always be a list or None
- knockout gene HOT 3
- FVA in COBRAme HOT 1
- Issues that need to be fixed to run Docker version successfully HOT 11
- Allow lower case nucleotide sequences or make error explicit
- Runtime error when attempting to remove genes from model HOT 3
- Access to MiniME or pickled version of iJL965_ME that does not depend on MiniME? HOT 9
- COBRAme workshop
- [question] Auxotroph E. coli
- In algorithms.py,function binary_search() HOT 2
- biomass constituents HOT 1
- Changing objective function for optimization in COBRAME
- Cannot convert expression to float in build_me_model.ipynb HOT 1
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