sarah145 Goto Github PK

30daychartchallenge

batch_correct

Comparison of batch correction methods for scRNA-seq data - basically a clone of BatchBench

bone_marrow_analysis

Analysis of public and unpublished scRNA-seq data from bone marrow donors

ccplotr

An R package for visualising cell-cell interactions

crt_tutorial

Single-cell RNA-seq analysis tutorial for the Cancer Genomics session of the CRT RTP (year 3)

data-science-for-life-science

CRT outreach program to assist life scientists in learning basic data science skills.

epigenomics_case_study

Code to reproduce analysis and figures for 'A multi-omics approach to characterising the immune cell landscape in renal cell carcinoma'

hsc_interactome

Code for HSC Interactome shiny app

msc_project

Work for my MSc thesis - 'Characterising transcriptional variation in tissue-resident macrophage subsets using sc-RNA-seq'

myeloid_analysis

mygnome

Project for CRT Ideas Week 2019

sarah145

sarah145.github.io

sarahseq

R Shiny app for analysing personal genomics data

scib

Benchmarking analysis of data integration tools

scriabin

Analysis of cell-cell communication at single-cell resolution

scrna_pre_process

Processing scRNA-seq data with kallisto|bustools pipeline

tissue_detector

Cancer as a tissue anomaly: classifying tumor transcriptomes based only on healthy data

vizbi