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appning

APPNING 2018 Workshop

aspp2015

Lecture materials for ASPP 2015 in Munich

atlases

Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space

biopreprint

Preprint classes for biological journals

brainhack-paris2017

streamlines dissection

chp_gmm_segmentation

Segmentation of Choroid Plexus using Gaussian Mixture Model

clinica

Software platform for clinical neuroimaging studies.

contributions_to_ad_paper

data-analysis

Data Science Using Python

dbs

MATLAB toolbox for cluster-wise correction in (brain) connectivity analysis

dbs_v0.1_old

Paper: Degree-based statistic (DBS) and center persistency (CP) for brain connectivity analysis (2016) Human Brain Mapping

describing_data

Code for data visualization

dipy

Diffusion MR Imaging in Python

dominanceanalysis

Dominance Analysis (Azen and Bodescu), for multiple regression models: OLS, GLM and HLM

ec_atlas

An Extrinsic Connectivity Based Atlas by Guillermo Gallardo (INRIA).

gnode

git exercise 5

hcp-tractography

Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset

jeu-de-la-vie

Automate cellulaire

micaopen

Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute

mindt

MRI image processing for rodents

minimalsphinx

A repo with a minimal Sphinx example for Python documentation.

multiatlastt

multi atlas transfer tools for neuroimaging (maTT)

mum

the description

myelin_map

nilearn

Machine learning for NeuroImaging in Python

nipy

Neuroimaging in python

nipype

Workflows and interfaces for neuroimaging packages

nistats

Modeling and statistical inference on fMRI data in Python

parietalretreat

patho-propagation

network modeling of pathology propagation