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Russell Durrett's Projects

airflow icon airflow

Airflow is a system to programmatically author, schedule and monitor data pipelines.

ansible-appsoma-mesos icon ansible-appsoma-mesos

Complete playbooks to create a Mesos cluster on AWS for Appsoma Welder and associated tools

bees_knees icon bees_knees

scripts and tools for parallelized bacterial genome assembly

cashier icon cashier

Make Sense of Expressed Barcode Tag (EBT) Data

corona icon corona

Scripts for analyzing circular RNAs

ea-utils icon ea-utils

Automatically exported from code.google.com/p/ea-utils

fastq-pair icon fastq-pair

Match up paired end fastq files quickly and efficiently.

gtf-to-genes icon gtf-to-genes

Automatically exported from code.google.com/p/gtf-to-genes

mixseq icon mixseq

Transposon-based Barcoded Genome Assembly

nyc_igem icon nyc_igem

Source Code from the NYC Software 2011 Team

perl icon perl

scripts, modules - whatever I'm currently working on

scsnp icon scsnp

variant exploration in single cell data

syntenyimager icon syntenyimager

Containerized application to capture, process and stream video in real time

vdjviz icon vdjviz

A lightweight immune repertoire browser

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