Comments (7)
Although, we could make an R interface to git...
from eml.
@schamberlain How would you do that? I wondered that too at Scifoo where I met the creator of Authorea. We talked about a ropensci interface to Authorea but ultimately it boils down to a git interface.
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Hmm, not sure, wil think about it
On Tuesday, June 25, 2013, Karthik Ram wrote:
@schamberlain https://github.com/SChamberlain How would you do that? I
wondered that too at Scifoo where I met the creator of Authoreahttps://www.authorea.com/.
We talked about a ropensci interface to Authorea but ultimately it boils
down to a git interface.—
Reply to this email directly or view it on GitHubhttps://github.com/ropensci/reml/issues/4#issuecomment-20029787
.
from eml.
One might start with an RCurl implementation of the Github API. That would provide data for things of interest (commits, issues, activity, org, users, etc) http://developer.github.com/v3/
For git commands though you might be stuck with wrapping system
calls (and possibly having to parse their return text from intern=TRUE
). Perhaps that could be adequate. It would allow something like eml_publish(..., dest=github)
but I'm not sure if that would actually be useful. I'd want a function to write the URL endpoints into the EML but I might rather push myself...
from eml.
I have some functions I already wrote to do that blog post on github stats on our repos - functions are in the ropensci::sandbox
repo. Looks like you can actually create commits via the API, and perhaps push, though not positive about that.
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Okay, fixed user-agent string now required, just a few functions in the sandbox repo: https://github.com/ropensci/sandbox
Should probably make a separate repo for github...
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Not sure that it makes sense to have a publish("file.xml", repo="github")
in the same sense as publish("file.xml", repo="KNB")
or publish("file.xml", repo="figshare")
. Github isn't indexed in the same way as these data repositories -- not clear where the data would be published to on Github anyway.
In particular, the other repositories have their own notion of metadata, so it makes sense to have a function that can map EML metadata into, say, the required figshare title, category, tag, author, and description boxes. The same is not true for Github. Users can always use eml_write
and put their EML where-ever they want.
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Related Issues (20)
- set_attributes forces all numeric fields to have storageType = "float" HOT 7
- Taxonomic Coverage and bibtex HOT 1
- Species name epithet is not handled the way specified in the EML schema HOT 2
- Error with molePerKilogram in unit list returned by get_unitList() HOT 3
- dataset and datatable entries from README example fail HOT 2
- `shiny_attributes` performance improvments HOT 8
- Revisit how users can find a learn to use the `eml$*` constructors HOT 2
- Add a minimum version requirement on taxadb and wait to release the next version of this package HOT 1
- Web scraping | sapply function | Error in readBin(5L, "raw", 65536L) : Failure when receiving data from the peer HOT 1
- Creating EML elements with XML attributes HOT 2
- Duplicate person when using `write_eml()` HOT 2
- Set attributes for properties, e.g. `<title xml:lang="eng">` HOT 3
- Function to convert DataCite metadata to EML: good fit for this package? HOT 7
- `<![CDATA[` not always recognized HOT 1
- [Units] Discussion about current unit list HOT 5
- `set_coverage()`: Express common names in `commonName` in `taxonomicCoverage` HOT 10
- `set_responsibleParty()`: allow to create organization parties HOT 1
- namespace conflict introduced when importing/exporting EML generated under older schema
- EML::eml_validate conflicts with knb.ecoinformatics.org parser & appears to introduce invalid xml into valid files HOT 1
- EML seems to have trouble with foreign key constraints HOT 2
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