robchoudhury Goto Github PK

avocado_tasting

I brought home 7 avocado varieties from south Florida and me and my lab tasted and rated them. I wanted to do a small analysis of the tastings.

birdage

random dataset i stumbled on about bird age

carla_pm_data

powdery mildew disease incidence ratings and some botrytis data from Carla Thomas (formerly UCCE), collected while working with Doug Gubler

colorblindr

An R package to simulate colorblindness on R figures.

datavizcode

Code for APS data visualisation workshop.

datavizr

grape_pm_pdmr

grape powdery mildew varietal trial ratings

haiti_production

map of crop productions in Haiti

inapreliminary

informationtheory

Epidemiology PLP6905

katrina_hwm

plotting high water mark from Hurricane Katrina

mango_rating

rating different mango varieties

networksplantpathology

ICPP 2018 Workshop: Network Analysis in Plant Pathology

opp_workshop_multivariate

Supporting data and information for the Workshop "Introduction to Multivariate Statistics Using R" presented at the International Congress of Plant Pathology 2018 Boston USA

pe_light_temp_germ

I looked at how light and temperature affects sporangia germination for peronospora effusa (syn. P. farinosa fsp. spinaceae), the causal agent of downy mildew on spinach.

pm_filaree

sizes for spore description for first report of powdery mildew on red-stemmed filaree in California. See https://apsjournals.apsnet.org/doi/full/10.1094/PDIS-05-15-0527-PDN. Seemed to be the first (official) appearance of the pathogen in California and maybe North America.

pm_tallow

I found powdery mildew on a chinese tallow tree (Triadica sebifera) outside my favorite schwarma place in Davis. I described it. It looks like a new-ish species, but its hard to tell without access to true holotypes of other pm's on tallow that have been found through the ages. More info at https://apsjournals.apsnet.org/doi/full/10.1094/PDIS-07-16-1001-PDN

pomegranate_cytospora

Francesca Peduto-Hand asked me to measure conidia, describe cultures, and look at pycnidia for a pathogen that they found on pomegranate. See https://apsjournals.apsnet.org/doi/abs/10.1094/PDIS-11-13-1133-PDN for more details.

quantitative-pathogen-ecology

robchoudhury.github.io

Personal website for Robin Choudhury, PhD

sdm_biofungicide

results from my biofungicide trials that I ran in the Salinas/Pajaro valley for spinach downy mildew in 2013-2016.

seedhealth

sigmoflex

Proposal to Quantify Differences Between Disease Progress Curves

spore_trap_information_theory

texascyclospora

Playing around with data from Texas Public health for the Cyclosporiasis outbreak

viridislite

Implementation of the Matplolib 'viridis' color map in R (lite version)