Pomegrenate issues on CentOS 7.3 about doppelganger HOT 5 CLOSED

Yay!

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Interesting. Thanks for the report. What version of numpy are you using and how did you install it?

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I am running numpy 1.13.0

[camidus@urbanizer ~]$ pip freeze | grep numpy
numpy==1.13.0

I installed it by running: pip install numpy

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We recommend installing numpy with Anaconda or another pre-built option. Otherwise it can be quite a difficult and tedious process to get it build.

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Thanks @katbusch , Anaconda was also installed but not correctly. I removed both numpy and Anaconda and reinstalled Anaconda 2. Now everything is fine, installation was successful:
[root@urbanizer doppelganger]# pip install . Processing /home/camidus/doppelganger Collecting cvxpy==0.4.8 (from doppelganger==0.1.0) Requirement already satisfied: numpy>=1.11.0 in /root/anaconda2/lib/python2.7/site-packages (from doppelganger==0.1.0) Requirement already satisfied: pandas>=0.19.0 in /root/.local/lib/python2.7/site-packages (from doppelganger==0.1.0) Collecting pomegranate>=0.7.1 (from doppelganger==0.1.0) Using cached pomegranate-0.7.3.tar.gz Requirement already satisfied: requests>=2.0.0 in /root/anaconda2/lib/python2.7/site-packages (from doppelganger==0.1.0) Requirement already satisfied: six>=1.10.0 in /root/.local/lib/python2.7/site-packages (from doppelganger==0.1.0) Collecting scs>=1.1.3 (from cvxpy==0.4.8->doppelganger==0.1.0) Collecting multiprocess (from cvxpy==0.4.8->doppelganger==0.1.0) Collecting CVXcanon>=0.0.22 (from cvxpy==0.4.8->doppelganger==0.1.0) Collecting ecos>=2 (from cvxpy==0.4.8->doppelganger==0.1.0) Requirement already satisfied: toolz in /root/anaconda2/lib/python2.7/site-packages (from cvxpy==0.4.8->doppelganger==0.1.0) Requirement already satisfied: scipy>=0.15 in /root/.local/lib/python2.7/site-packages (from cvxpy==0.4.8->doppelganger==0.1.0) Requirement already satisfied: fastcache in /root/anaconda2/lib/python2.7/site-packages (from cvxpy==0.4.8->doppelganger==0.1.0) Requirement already satisfied: pytz>=2011k in /root/.local/lib/python2.7/site-packages (from pandas>=0.19.0->doppelganger==0.1.0) Requirement already satisfied: python-dateutil in /root/.local/lib/python2.7/site-packages (from pandas>=0.19.0->doppelganger==0.1.0) Collecting joblib>=0.9.0b4 (from pomegranate>=0.7.1->doppelganger==0.1.0) Using cached joblib-0.11-py2.py3-none-any.whl Requirement already satisfied: networkx>=1.8.1 in /root/anaconda2/lib/python2.7/site-packages (from pomegranate>=0.7.1->doppelganger==0.1.0) Collecting dill>=0.2.6 (from multiprocess->cvxpy==0.4.8->doppelganger==0.1.0) Requirement already satisfied: decorator>=3.4.0 in /root/anaconda2/lib/python2.7/site-packages (from networkx>=1.8.1->pomegranate>=0.7.1->doppelganger==0.1.0) Building wheels for collected packages: pomegranate Running setup.py bdist_wheel for pomegranate ... done Stored in directory: /root/.cache/pip/wheels/e7/32/98/8b89b0775c143e2520ac966981c0382c77c45723caf0cccf6a Successfully built pomegranate Installing collected packages: scs, dill, multiprocess, CVXcanon, ecos, cvxpy, joblib, pomegranate, doppelganger Running setup.py install for doppelganger ... done Successfully installed CVXcanon-0.1.1 cvxpy-0.4.8 dill-0.2.6 doppelganger-0.1.0 ecos-2.0.4 joblib-0.11 multiprocess-0.70.5 pomegranate-0.7.3 scs-1.2.6 [root@urbanizer doppelganger]#

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