rchikhi Goto Github PK
Name: Rayan Chikhi
Type: User
Location: France
Blog: http://rayan.chikhi.name
Name: Rayan Chikhi
Type: User
Location: France
Blog: http://rayan.chikhi.name
2022 WABI Pangenome workshop hackathon (AWS intro)
Serverless application to monitor an AWS Batch architecture through dashboards. CloudTrail creation fork
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
Benchmark of four minimal perfect hash libraries (phf, emphf, CMPH, Sux4J)
BESST - scaffolder for genomic assemblies
Conda recipes for the bioconda channel.
Box of not RelAted Work
A single molecule sequence assembler for genomes large and small.
Remove tips and short isolated vertices from a de bruijn graph that resides in a file, in constant memory
It outputs the alignment of an assembler using simple exact matching and bwa mem
Closed cyncmers in pure C
Cuttlefish2 except that it also output approximate mean k+1-mer counts on the unitigs, and many other specific optimisations for my use case
Naive de Bruijn graph implementation in python
de Bruijn graph construction tool
Docker image for the minia assembler
Practical Dynamic de Bruijn Graphs
:hospital: Patches for Homebrew formulae
A FASTQ-only gzip decompressor that supports approximate random access, based on libdeflate
GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology
Personalized language model from Whatsapp chat history
:beers::penguin: Core formulae for the Linuxbrew package manager
Index and query k-mer matrices in BGZF
A C++ API to read and write kff files
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.