rbrauning Goto Github PK

2016-01-28-training-prep

2016-01-29-auckland

bbs_meeting_2015

Programme, notes, slides etc. related to BBS meeting prior to MapNet2015

datasciencecoursera

datasciencecoursera

datasharing

The Leek group guide to data sharing

do_user_scripts

filebutler

Utility for finding and pruning old files in huge directory trees.

gbs_workshop

Workshop material

genomicsaotearoa.github.io

Code and files for Genomics Aotearoa github.io website

git-novice

Software Carpentry introduction to Git for novices.

github-for-developers-7

gusmap

Genotyping Uncertainty with Sequencing data and linkage MAPping

high-quality-genomes

This repository aims to hosting workflows/codes that have been developed for GA high-quality-genome projects.

hpc-intro

Lesson materials for an Introduction to High Performance Computing in the tradition of Software Carpentry

human_genomics_pipeline

A Snakemake workflow to process single samples or cohorts of paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.

kgd

Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment

mro

Creating Effective Graphs with Microsoft R Open

nextflow_workshop

A workshop to help you integrate Nextflow in your analysis workflows for reproducible and scalable pipelines.

openrefine-ecology-lesson

Lesson on OpenRefine for ecology

planets

problems4rob

snakepipes

Customizable workflows based on snakemake and python for the analysis of NGS data

snpgbs

A simple bioinformatics workflow to identify single nucleotide polymorphism (SNP) from Genotyping-by-Sequencing (GBS) data.

spreadsheet-ecology-lesson

This repository contains Data Carpentry lessons on using spreadsheets for data wrangling.

test

test-repo

This is a test repo.

thesis