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aova

Automatic Optoacoustic Vessel Analyzer

baseclass

Matlab SuperClass to be used for normal processing classes, i.e. not hardware interfacing classes

basehardwareclass

abstract class for general i/o and convenience

camera_coolsnap

Hardware interfacing library to directly access CoolSNAP camera from MATLAB.

cascade_trigger

cascader_led

cellscreening

Code used to evaluate fluorescence and optoacoustic datasets containing protein expressing cell colonies.

daq_spectrum_m4i4420

Matlab class for the M4I.4420-X8 Spectrum DAQ

foam_submodules

all required repositories as submodules for easy adding and maintenance of all the hardware code

frangi_filter

Matlab class for Frangi filtering of 2D datasets, using build in Matlab functions but adds plotting and more options...

frequencyfilter

Simple Matlab class for fast and efficient frequency filtering of 2d and 3d datasets

image_filter

Image filter class, applies various filters to 2d dataset. Especially convenient for applying multiple filters.

laser_brightsolutions_onda

Matlab class for the Onda ns Q-Switched DPSS laser

laser_edgewave_innoslab

laser_sirah_credo

Matlab class for the Sirah Credo Dye Laser

matlabutilities

General utilities useful for various processing tasks, used in many other repositories from us.

mex_c_serial_interface

n interface for faster serial within matlab by implementing c_serial code base and mex functions.

mvolume

A object oriented approach in MATLAB to store, process, and access volumetric datasets. Initiated to handle optoacoustic datasets but could potentially be used in other fields.

oam_data

Data classes storing OAM data for post-processing etc

oapreprocessor

A preprocessing toolbox for data acquired with optoacoustic microscopes.

postprogui

Matlab based post-processing GUI for processing and visualizing 3D and 2D datasets as well as post processing with various filters.

powermeter_coherent_labmaxprossim

https://www.coherent.com/measurement-control/measurement/laser-power-and-energy-meters/labmax-pro-ssim

pulseblaster3000

Custom, teensy based trigger board for various outputs

quadrature_decoder_board

Schematics, PCB and C++ / Matlab code to record quadrature encoder signals at (very) high speeds\

stage_owis_ps10

stage_pi_c867

Motor controller library to interface Physik Instrumente C867 controller.

stage_rspro

A stepper motor driven stage based on an RS Components controller and an Arduino. Can be exchanged with a Polulu stepper motor driver as well.

stage_thorlabs_ddsm50

Stage_Thorlabs_DDSM50

stage_thorlabs_drv250

A MATLAB interfacing library for the DRV250 stage used in combination with the Benchtop Stepper Motor Controller.

stage_thorlabs_lnr50sek1

Matlab class for the LNR50SEK1 mechanical Thorlabs stage