ravindra-raut Goto Github PK

applied-computational-genomics

Applied Computational Genomics Course at UU: Spring 2020

appliedgenomeresearch

course about NGS data processing: genomics and transcriptomics

athalianatetranscripts

Arabidopsis thaliana TE transcript-based annotation added on top of TAIR10 annotation

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

awesome-r-learning-resources

A curated collection of free resources to help deepen your understanding of the R programming language. Updated regularly. Contributions encouraged via pull request (see contributing.md).

awosome-bioinformatics

A curated list of resources for learning bioinformatics.

berd_r_courses

Slides and materials for the OHSU OCTRI BERD R courses

bio-repeatmasker

This is a simple, under development raw Repeat Masker output file parser. The idea is to help parse, search and filter the file, making easy tasks like selecting groups of repeat events and classes. Another feature is to retrieve events in a given genomic coordinate interval.

biojava

:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.

biopython.github.io

Source of biopython.org website, migrated from MediaWiki

book

bookdown

Authoring Books and Technical Documents with R Markdown

bootcamp

Biocore bootcamp

bosc_materials

Misc. documents for the Bioinformatics Open Source Conference (BOSC), https://www.open-bio.org/events/bosc/

cheatsheets

Official Matplotlib cheat sheets

compgen2021

complex_figure_examples

Gallery and R code for published scientific figures

course_oor

Open Online Introduction to R Course

coursera

Script for downloading Coursera.org videos and naming them.

craigwhippo

cs-video-courses

List of Computer Science courses with video lectures.

cv

My CV built using RMarkdown and the pagedown package.

cv-1

:scroll: My Data Driven CV written with R, YAML, & LaTeX

datadrivencv

R package for building customizable CVs from spreadsheets

doubletfinder

R package for detecting doublets in single-cell RNA sequencing data

ds-dm-training

DS-DM-training

dsiexplore

Exploratory data analysis and statistics with LearnR for OHSU Data Science Institute

earlgrey

Earl Grey: A fully automated TE curation and annotation pipeline

edta

Extensive de-novo TE Annotator

evop2020

Python in 2 days for EVOP 2020 in Berlin