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1brc

1brc-1

1️⃣🐝🏎️ The One Billion Row Challenge -- A fun exploration of how quickly 1B rows from a text file can be aggregated with Java

alg-viz

String algorithm visualizations

astar-pairwise-aligner

A pairwise sequence aligner written in Rust

automata

Code accompanying https://arxiv.org/abs/2008.04971

bapc21-site

bapctools

Tools for developing ICPC-style programming contest problems.

bapctools-git

AUR package for BAPCtools

bfs-aligner

A quick demo of extension-aligning Fasta reads to GFA files for unit-costs using BFS and greedy matching

biwfa-paper

Bidirectional WFA (WFA2-lib development branch)

block-aligner

SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.

cargo

The Rust package manager

cargo-depgraph

Creates dependency graphs for cargo projects using `cargo metadata` and graphviz.

checktestdata

checks integrity of test data in programming contests like the ACM ICPC

code-review

Code Reviews in Emacs

domjudge

DOMjudge programming contest jury system

doomemacs

An Emacs framework for the stubborn martian hacker

edlib

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

feh

fast and light Imlib2-based image viewer

flamegraph

Easy flamegraphs for Rust projects and everything else, without Perl or pipes <3

gurk-rs

Signal Messenger client for terminal

hanabi

hugo-coder

A minimalist blog theme for hugo.

jekyll-photo-gallery

Jekyll plugin to generate nice photo galleries easily.

jumbodb

De Bruijn graph construction for large k.

just-shell

Tiny shell for invoking `just` rules.

longest-common-repeat

mako

A lightweight Wayland notification daemon

minimizers

Measure experimental density of bd-anchors

nwerc-2022

NWERC Website