radiantgenomics Goto Github PK
Name: Radiant Genomics
Type: Organization
Bio: Radiant Genomics
Location: Emeryville, CA
Radiant Genomics's Projects
adam
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
artemis
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
cdhit
Fast gene and protein clustering tool via CJVI
elph
Private mirror of ELPH gene motif finding with Gibbs Sampling
glimmer
Private mirror of glimmer gene calling with Interpolated HMM
hmmer
Private mirror of HMMER sequence homology alignment with HMMs
interproscan
mango
Visualization tools for genomic data. Apache 2 licensed.
map_align
Contact map alignment
prodigal
Prodigal Gene Prediction Software using Dynamic Programming
quickmerge
A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.
sequenceserver
Intuitive local web frontend for the BLAST bioinformatics tool
vsearch
Private fork of open-source version of usearch, tool for metagenomics
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