Comments (2)
@bgruening I'm not sure if this is relevant, but when I create a QIIME 2 conda environment on my local machine I get this error in regards to the deblur dependency (the one that appears to be missing on usegalaxy.eu causing the tool failures)
SafetyError: The package for deblur located at /home/anthony/miniconda3/pkgs/deblur-1.1.1-pyhdfd78af_0
appears to be corrupted. The path 'site-packages/deblur/workflow.py'
has an incorrect size.
reported size: 34086 bytes
actual size: 34130 bytes
The dependency appears to still work fine for me, but this error stood out to me as potentially related. It isn't a fluke I see it every time I create an environment.
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This is most often happening if you edit files in conda environments. Anyway the qiime2 tools should use the container, i.e. the conda error should be unrelated.
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Related Issues (18)
- Config files and dynamic input params don't seem to cooperate HOT 8
- Add simple parameter handling
- Add QIIME 2 metadata handling
- Create <sections> for inputs, parameters, and collapse default/optional inputs/params HOT 1
- Add visualization plugin for .qzv files HOT 3
- QZA import/export inside Galaxy HOT 1
- Get rid of the zip file info from the uploader tool HOT 3
- Consider using docker-compose for stand-alone deployments HOT 4
- ToolShed deposit HOT 4
- Use DOI citation type when possible
- Some small things to improve HOT 2
- Extra text in tool version HOT 2
- qiime2_core__tools__import stacktrace from usegalaxy.eu HOT 21
- No tools:unzip_collection, Flatten collection and Sort HOT 6
- Running on Apple Silicon M1 HOT 1
- Ensure that
- Ensure that hidden actions are rendered in q2galaxy HOT 1
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