Code Monkey home page Code Monkey logo

Comments (2)

ailzhang avatar ailzhang commented on September 17, 2024

@mateuszbuda would you mind taking a quick look? Thanks!

from hub.

mateuszbuda avatar mateuszbuda commented on September 17, 2024

@Anonymousjoy Thanks for trying my model.
You're right that the example code does not produce correct segmentations due to a simplification in the normalization step. The reason for this is that the model was trained to perform segmentation of 3D MRI volumes by concatenating predictions for 2D slices. The example code only shows how to forward one 2D slice.
The normalization step requires the entire volume which I didn't want to upload on GitHub for the sake of data size.
Here is a link to normalization function that works on volumes: https://github.com/mateuszbuda/brain-segmentation-pytorch/blob/8ef2e2d423b67b53ec8113fc71a9b968bb0f66e7/utils.py#L77

from hub.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.