Comments (1)
"reduce_all_segments" (combining CNV segments from all chromosomes together) should finish in seconds. It may be a filesystem issue or your data was in a format that the segmentation algorithm did not like and thus failed to produce any segments. Please check our online help on how to check those files.
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Related Issues (20)
- Licensing issues HOT 8
- Run on long reads data? HOT 2
- Lacking python3 packages in docker HOT 5
- Suggestion on input bams? HOT 2
- Empty Output HOT 3
- The meaning of minus cp HOT 11
- maestre: libbz2.so.1.0 not found HOT 2
- Bug at "--period" option HOT 4
- [ERROR] [normalize] Error Message HOT 5
- caller_path HOT 1
- unable to infer tumour purity HOT 4
- input to pyclone-vi HOT 1
- unable to open file: name = '/data/modif_genome_test1/model_selection_l og/model_selection.h5', errno = 2, error message = 'No such file or directory', flags = 0, o_flags = 0 HOT 7
- CNV.output.tsv not generated HOT 3
- https://www.yfish.org/display/PUB/Accucopy is missing (404) HOT 2
- can accucopy support create a baseline by normal samples and then use tumor only samples? HOT 1
- unmatched chromosome name get error HOT 6
- Failed to complete command task: 'rm_individual_seg_files' launched from master workflow, HOT 11
- Exception in thread TaskFileWriter-Thread: HOT 7
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