Comments (1)
I just run the same command here and it works fine.
ncbi_tx = NcbiTx()
downloads the NCBI taxdump file and my guess is that you probably had some network issues at the time.
Alternatively you can always use local files downloaded independently ncbi_tx = NcbiTx(files='taxdump.tar.gz')
or an alternative url (http instead of default ftp) ncbi_tx = NcbiTx(urls='http://ftp.ncbi.nih.gov/pub/taxonomy/taxdump.tar.gz')
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