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3d-mri-brain-tumor-segmentation-using-autoencoder-regularization

Keras implementation of the paper "3D MRI brain tumor segmentation using autoencoder regularization" by Myronenko A. (https://arxiv.org/abs/1810.11654).

3d-scar-quantification

Quantification of scar burden in HCM patients using 3D-UNet based architecture.

autocrop

:relieved: Automatically detects and crops faces from batches of pictures.

captk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk/

cocoapi

COCO API - Dataset @ http://cocodataset.org/

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

deep-learning-with-pytorch-1.x

Deep Learning with PyTorch 1.x, published by Packt

deep-learning-with-r-cookbook

Deep Learning with R Cookbook, published by Packt

deepcac

Fully automatic coronary calcium risk assessment using Deep Learning.

deeplabv3plus-pytorch

DeepLabv3, DeepLabv3+ and pretrained weights on VOC & Cityscapes

deeplearning101

Code about DeepLearning101 Book

deepradiology_rectum

dicom-to-jpg

Convert all DICOM (.dcm) images in a folder to JPG/PNG and extract all patients information in a '.csv' format in a go using python.

dog-cat-classifier

Dog and cat image classifier with deep learning

examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

fewshot_gan-unet3d

Tensorflow implementation of our paper: Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning

grad-cam-pytorch

PyTorch implementation of Grad-CAM, vanilla/guided backpropagation, deconvnet, and occlusion sensitivity maps

gradcam_plus_plus-pytorch

A Simple pytorch implementation of GradCAM and GradCAM++

hd-bet

MRI brain extraction tool

hello-world

new repository

image

Computer Vision and Image Recognition algorithms for R users

medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

monai

AI Toolkit for Healthcare Imaging

mri

nfnets-pytorch

NFNets and Adaptive Gradient Clipping for SGD implemented in PyTorch

nnu-net_opscc

Brief code for training multi-modal deep learning segmentation models of oropharyngeal squamous cell carcinoma on CT and MRI using nnU-Net framework.

nnunet

npc

probabilistic-unet-pytorch

A Probabilistic U-Net for segmentation of ambiguous images implemented in PyTorch

pytorch-cnn-visualizations

Pytorch implementation of convolutional neural network visualization techniques