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Name: Jonathan E. Pekar
Type: User
Name: Jonathan E. Pekar
Type: User
Agent Based Synthetic Epidemic
baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).
Bayesian Analysis with Python by Packt
Code For COVID-19 Growth Rates Work
Pythonic command line arguments parser, that will make you smile
Efficient evolution from protein language models
FAVITES (FrAmework for VIral Transmission and Evolution Simulation)
A simplified (and much faster) simulation pipeline specifically for COVID-19 contact + transmission + phylogeny + sequence simulation
Pipeline for longitudinal bacterial isolate analysis
Python codes for common Machine Learning Algorithms
Nextstrain build for novel coronavirus SARS-CoV-2
Algorithm for classifying evolutionary patterns in ancestral reconstruction trees (ARTs)
Data hosting for supplementary materials
An open access book on scientific visualization using python and matplotlib
My scripts/notes from the San Diego COVID sequencing effort
Solutions of practice problems from the Richard McElreath's "Statistical Rethinking" book.
Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction
A collection of documented examples using TreeTime
Corpus analysis examining the use of "umm" in text-based communication via the Reddit corpus.
Simulates virus trees within a given transmission tree
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.