pankratzlab Goto Github PK
Type: Organization
pankratzlab's Projects
bakeoff
cue
Deep learning framework for SV calling and genotyping
donorcheck
Utility for validating donor typing entries to DonorNet
exomedepthexample
Example for running exomeDepth
genscorepipeline
Genetic Score Pipeline, Merge Extract Pipeline
genvisis-docs
Documentation for Genvisis
genvisis-website
Text and images for the Genvisis webpage
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
igv-snapshot-automator
Script to automatically create and run IGV snapshot batchscripts
igv-vm
Build IGV instance that can take screenshots without a GUI or X11
igv-xvfb
IGV with Xvfb
jflow
kd-match
kd-tree matching for nearest neighbor selection
long-read-plot
Plots for long read sequencing data
matchsamples
mosdepth-docker
nativejfilechooser
Native file chooser for Swing using JavaFX if available
ngs-pca
Methods for running PCA on NGS data
ngs-tl
Estimate telomere length (TL) from whole genome sequencing (WGS)
pankratzlab.github.io
rufus
RUFUS k-mer based genomic variant detection
supernovo
DeNovo Mutation Identification and Validation
warp
WDL Analysis Research Pipelines
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