Code Monkey home page Code Monkey logo

Comments (4)

ArtyomKaltovich avatar ArtyomKaltovich commented on June 1, 2024

Hello.

If I correctly got the error's reason I can add error message by myself.

from kb_python.

Lioscro avatar Lioscro commented on June 1, 2024

Hi, @ArtyomKaltovich,
I think a transcript entry in your GTF file is missing a transcript_id group (in the last column of the GTF). Without that, it isn't possible to create a transcript-to-gene mapping.
Could you check if that is the issue?

from kb_python.

ArtyomKaltovich avatar ArtyomKaltovich commented on June 1, 2024

Hello @Lioscro.

I run kb for gff file, as I got they are not supported for now, but it hard to understand with such error, could you add more readable error message.

Thank you.

from kb_python.

github-actions avatar github-actions commented on June 1, 2024

This issue is stale because it has been open 30 days with no activity. Remove stale label or comment or this will be closed in 5 days

from kb_python.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.