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abba_baba

Scripts for running abba baba

adaptive_introgression

ampril-genomes

scripts for the project of seven thaliana genomes assembly

ann_genome_comp

argentina_helianthus

Scripts used for Mondon et al., 2017

astral

Accurate Species TRee ALgorithm

backup_website

Minimalist two-column jekyll theme modified for Greg Owens

biol470data

biol525d

Course material for UBC Biol525D

dpart

Partitioned D statistic for Owens et al 2015

dune

haploblocks

Scripts and resources for the haploblocks manuscript

hel_hyb_spe_2018

Scripts for the hybrid speciation paper using RNAseq data

helianthus_diversity

This repository contains scripts and filtered data for Baute et al., 2016.

helianthus_hybrid_species_2021

hmm

A hidden markov model specifically designed for assigning parentage in a hybrid species.

hyb_spe_sim

A simulation of hybrid species formation using perl

index_investigator

Scripts and dataset for index switching paper

intro-genomics

UVic Biol 470 Introduction to Computational Genomics

lifespan_sims

machine_learning

This contains an introductory lecture on machine learning

owensgl.github.io

Website for Gregory Owens Lab

parallel_gw

Scripts used for the an upcoming greenish warbler paper

pop_gen

Population genetic scripts

reformat

Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format

sb_meta

Scripts the UBC stickleback meta-analysis

shell_data

For lab 1 of biol 470

sockeye

A set of scripts and simulations to generate datasets for the UBC bioinformatics workshop

socks

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