outcastaaa Goto Github PK

-faops-

在 GitHub 上建立一个 repo, 使用 Markdown 格式, 自己把 faops 的 tests/ 目录下的测试还原成可以运行的命令, 写一个关于 faops 的使用说明书. 每完成一段代码或文档, 用 GitHub Desktop 将本地的修改同步到 GibHub 上

10x-scatac-2019

Publication Page for Satpathy*, Granja* et al 2019

another--atac-seq-pipeline

ENCODE ATAC-seq pipeline

archr

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

atac

basic ATAC-seq pipline and principle

atac_diversity

Differences in chromatin accessibility across brain compartments in species reflected by ATAC data accessibility

biccn_m1_evo

Analysis for BICCN cross-species primary motor cortex project

bioinformatics-learning

bioinformatics learning

chatgpt_academic

科研工作专用ChatGPT拓展，特别优化学术Paper润色体验，支持自定义快捷按钮，支持markdown表格显示，Tex公式双显示，代码显示功能完善，新增本地Python工程剖析功能/自我剖析功能

genetic-evolution

DOI：/10.1038/s41586-022-04677-2

in-depth-ngs-data-analysis-course

methylation-analysis

Bioinfo procedure of methylation analysis

note_on_snapatac

there is some notes and links about SnapATAC in this repository

perl

perllearning

picturing

learn how to draw basic pictures

pseudomonas

pseudomonas-hgt

r_learning

some sample code of R, especially picturing.

scatac_code

scATAC_code workflow

single-cell-multi-omics-profiling-of-ccrcc

Single-cell multi-omics profiling reveals the comprehensive epigenetic regulatory features of clear cell renal cell carcinoma

snapatac

Analysis Pipeline for Single Cell ATAC-seq

snatacutils

code in 'An atlas of gene regulatory elements in adult mouse cerebrum'

ssc_culture_ra_scatac

scATAC-seq analysis of SSC culture cells after retinoic acid stimulation

tsv-utils

eBay's TSV Utilities: Command line tools for large, tabular data files. Filtering, statistics, sampling, joins and more.