Comments (4)
Did you run all of the steps in the README.md file, including downloading the data and setting up paths to where the data resides in the .env file? The .srt files should be created by the script from the input data, and I suspect the input data path may have not been specified in the .env file.
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Yes. I generated .csv files by CMS_SynPuf_ETL_CDM_v5.py.
But I modified it to disable .srt check. The reason is that the script does not create srt-file
I tried master and unm-improvements
from etl-cms.
Try the new master branch, and use the scripts/get_synpuf_files.py script to fetch the files. The creation of .srt files used to use system commands. We now create the .srt files directly with python code.
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I verified that the .srt files are properly created by the ETL for all 20 parts.
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Related Issues (20)
- Column mismatch in create_CDMv5_tables.sql and load_CDMv5_vocabulary.sql HOT 1
- Error on Step 5 of Python ETL process HOT 2
- Person ID as integer, CMS's synthetic data has string IDs HOT 1
- CMS RIF to OMOP ETL? HOT 2
- CMS ACO CCLF --> OMOP V5 HOT 1
- md5 sums don't match files - https://github.com/OHDSI/ETL-CMS/blob/master/python_etl/README.md HOT 4
- Issue while running python code to get the claims data HOT 6
- Memory issue of steps 5 in ETL Script HOT 9
- drug_era, observation_period, cost column mismatch HOT 5
- Update ETL logic to support CDM 6.X HOT 5
- CDMv5.2 is not accessible HOT 2
- KeyError: 'Place of Service' HOT 3
- location_id is null for all care_site records HOT 3
- missing 'DE1_0_2010_Beneficiary_Summary_File_Sample_1.zip' HOT 5
- FTP server down? HOT 1
- Downloading final data HOT 1
- Incorrect URL to one source Synpuf file HOT 5
- Updating to newer CDM versions + upload R script available HOT 1
- key error '40213148'
- Convert CMS SynPUF to OMOP v5.4
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