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air.jl

Light-weight functional collections and utilities for Julia.

bairanalysis

Analysis code for BAIR R01 project

config

My set of common configuration files for use across logins.

cookbook

This repository is for a cookbook of my recipes.

cookbook2

This is a repository of recipes.

cortex-annotate

A toolkit for annotating contours and boundaries on the cortical surface.

cortex-data

A library for reading, writing, organizing, and computing over cortical surface data.

cortex-plot

A library for making 3D and 2D plots of the cortical surface.

cortex-register

A library for registering functions to the cortical surface.

cortexlib

cortical-magnification-tutorial

A tutorial on calculating cortical magnification in a variety of ways.

dgd

The repository for DGD, an object-oriented database management system.

fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

functionalutilities

Functional and persistent data structures for Julia

guacamole

recipe for guacamole

hcp-annot-v123

Tool for annotating iso-eccentricity and visual area boundary contours in V1, V2, and V3.

hcp-annot-vc

Annotation tool and data repository for the Human Connectome Project Visual Cortices

hcp-lines

Code and notebooks associated with the paper "Variability of V1, V2, and V3 in a Large Sample of Human Observers" by Benson, Yoon, Kay, Engel, and Winawer (2020).

hub-image-2022

immlib

A library of utilities for managing immutable and lazily-computed scientific data.

ipyvolume

3d plotting for Python in the Jupyter notebook based on IPython widgets using WebGL

jhub-image

julia

The Julia Programming Language

landmarkprf

A repository for experiments dealing with PRF models and retinotopic landmarks.

lazy-map

Lazy maps for Clojure

ldmud

Source Repository for LDMud

livecode-streamer

Tool for educators running "live coding" sessions to make their source files and terminal sessions viewable as static, read-only webpages.

mmasurfer

A Mathematica library that facilitates interaction with the FreeSurfer fMRI tool.

nben

The nben library is a collection of scientific and numerical routines for clojure and the JVM.

neurohackademy2019

Class and tutorial on retinotopic mapping for the 2019 Neurohackademy