python API still doesn't build on WCOSS2? about nceplibs-bufr HOT 6 CLOSED

Are you building the library with memory sanitization (asan)?

from nceplibs-bufr.

I was since that's my default configuration for GNU, but I can try turning that off if need be(?)

from nceplibs-bufr.

Just based on the output it might be worth disabling, then if that still doesn't work I can take a crack at it.

from nceplibs-bufr.

@jbathegit
python 3.12.10 on wcoss2 does not have numpy. In order to build the python extensions, a virtualenv with python 3.12.10 and numpy, etc. will need to be created and loaded as a prerequisite.

from nceplibs-bufr.

@aerorahul thanks, but setting up something like that for Intel is a bit out of my zone of expertise, so I'd need some help to proceed down that road.

@AlexanderRichert-NOAA thanks for the tip, and it does build and run now in GNU with asan and other flags disabled, at least within ctest. Looking at the test log, it looks like the command it ran was:

Command: "/apps/spack/cmake/3.20.2/intel/19.1.3.304/utnbptm3hrf7gppztidueu4jogfgemut/bin/cmake" "-E" "env" "PYTHONPATH=/lfs/h2/emc/obsproc/noscrub/jeff.ator/NCEPLIBS-bufr-GitHub/build6/python:/apps/prod/python-modules/3.8.6/gcc/10.2.0/lib/python3.8/site-packages:/apps/ops/prod/nco/core/prod_util.v2.0.14/ush" "/apps/spack/python/3.8.6/gcc/10.2.0/jsduzkud5ggl6jrg6lm4h7xmub5nq3ay/bin/python3.8" "/lfs/h2/emc/obsproc/noscrub/jeff.ator/NCEPLIBS-bufr-GitHub/nceplibs-bufr/python/test/test_misc.py"

but I haven't been able to figure out how to run that manually outside of ctest. If I try to do that it just gives me a "Permission denied", which I'm still trying to chase down. But some progress at least, so thanks again for that!

from nceplibs-bufr.

I'm able to work with this now if I just stay inside the ctest build environment - thanks everyone!

from nceplibs-bufr.