nimh-dsst Goto Github PK

abcd-fasttrack2bids

bids-validator-comparator

A small set of scripts to BIDS-validate and compare validator version outputs for OpenNeuro datasets.

brain_vol_longitudinal

ctdb2bids

An automated tool to go from a CTDB form legend and data download to BIDS phenotype TSV and JSON files.

data_repo_use

This repository contains code, data, and results of a survey assessing use and attitudes of various data repositories

data_share_reuse

data_sharing_reuse

datasci_job_ad

Open Data Scientist Job Ad

datasci_job_ad_2024

dataset-browser

A web app for searching metadata of neuroimaging studies and NIMH IRP studies.

dataset-phenotypes

Preparatory scripts for BIDS tabular phenotypic data in large neuroimaging datasets.

dsst-defacing-pipeline

Defacing algorithm to improve and evaluate accuracy for large datasets.

dsst-poster

dsst-rtd

DSST's readthedocs site repo.

dti-phenotyping

Scripts used to curate and analyze the DTI-Phenotyping dataset.

fmriprep_helpers

gitpubs

hpc_helpers

irritability-adhd-symptoms-and-inhibitory-control-in-the-abcd-study

Analysis code and meta-data for manuscript on irritability, ADHD symptoms, and inhibitory control in ABCD Study

metasearch

OpenNeuroLab MetaSearch App

nda-bids-upload

For uploading BIDS data to the NDA.

nda-study-1887

Scripts and data files used to convert anatomical MRI dicom data of the Autism Subtypes study to BIDS format, and to upload the dataset to NIMH Data Archive

ndx-photostim

holographic photostimulation extension to NWB standard

neurodocker-tester

A quick and dirty test ground for GitHub Actions/Workflows, the GitHub Packages service, and publishing a basic Neurodocker image.

nih_irp_pubdb

An application to catalog and measure NIH IRP publications.

ohbm2024tables

Holds a nice PDF version of HCP and PNC tables used in this OHBM 2024 abstract's analysis.

ohbm_2020_poster

code and data for the poster Identifying Data Sharing and Data Reuse in Full-text NIMH-funded papers

opencogdata

Collection of publicly available cognitive task datasets

opendata_gpt

osm

OpenSciMetrics (OSM) applies NLP and LLM-based metrics and indicators related to transparency, data sharing, rigor, and open science on biomedical publications.