Name: National Institute of Child Health and Human Development
Type: Organization
Bio: To investigate human development throughout the entire life process, with a focus on understanding disabilities and important events that occur during pregnancy
Twitter: nichd_nih
Location: Bethesda, Maryland
Blog: https://www.nichd.nih.gov
National Institute of Child Health and Human Development's Projects
a container for bcftools https://github.com/samtools/bcftools#readme
Building-A-CWL-Script
Building-A-Nextflow-Script
combine-matrices-docker
deseq2-docker
deployment
Simple container for Fastqc
Technical interop pilot using RNASeq data
gene-median-splitter-docker
Scalable gVCF merging and joint variant calling for population sequencing projects
hisat2_index-docker
Individualized Bayesian Inference Nextflow Workflow
:microscope: RNA-Seq workflow for Kids-First DRC
Elements of Style for Workflow Creation and Maintenance, users learn the know-how to ask scientific questions with these data using workflows agnostic to platform (laptop, on-premise HPC or cloud)
A minimal container for Phil Ewels' amazing MultiQC https://multiqc.info/
This repo is for tracking NCPI use cases.
Dockerfile for picard-tools
a nextflow and common workflow script for extracting parts of a cram
containerizing plink
Docker build of rMats
A pipeline to retrieve RNA sequencing data from SRA, perform alignment with hisat2 and characterize splicing events with rMATS 3.2.5.
Build a Container for bioconda samtools