nick-youngblut Goto Github PK
Name: Nick Youngblut
Type: User
Company: Arc Institute
Twitter: nick_youngblut
Location: Palo Alto
Name: Nick Youngblut
Type: User
Company: Arc Institute
Twitter: nick_youngblut
Location: Palo Alto
Automatically partition a phylogeny according to genetic and ecological data
Open source code for AlphaFold.
AlphaFold2 non-docker setup
snakemake wrapper for alphafold
Amplicon sequencing analysis workflow using DADA2 and QIIME2
An analysis and visualization platform for 'omics data
A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
Conda recipes for the bioconda channel.
Buckley lab protocols for conducting SIP studies
CAMISIM: Simulating metagenomes and microbial communities
Create a local pan-genome CRISPR database
Cleaning up Conda r-packages
Phylogenetic conservatism of functional traits in microorganisms
Boiler plate code for data science projects
GC content simulations for DNA-SIP experimental design
dotfile store
Fast genome-wide functional annotation through orthology assignment
A Python library for interacting with ENA's API
R-package to simplify tree ensemble models to decision ensemble, calculate feature and interaction importance, and construct variable networks.
Code for design of diagnostic PCR primers, and metabarcoding markers.
Finding Orthologous Reads and Genes
Convert GTDB taxonomy to NCBI taxdump format
Illumina read filtering pipeline for the GTL project
gutSMASH
An R package for analyzing high throughput sequence stable isotope probing data
HUMAnN 2.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).
Bioinformatics program inStrain
The second version of the Kraken taxonomic sequence classification system
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.