Related Issues (20)
- New module - dragonflye - for long-read assembly
- Update bakta to v1.8.2
- Allow dragonflye to polish draft genome with short-reads
- Improvements in forked repository: KmerFinder, Estimation of Reference Genome, Custom Quast, and Custom MultiQC Reports HOT 3
- URGENT: pin nf-validation version HOT 2
- Add flye to nf-core/bacass HOT 12
- Fix warning messages on process name
- Save trimmed parameter saying 'false' is not a valid choice HOT 2
- Running error of exit status 255 HOT 1
- Prokka and Bakta are reporting single log in multiqc report when running multiple samples
- Migration from nf-validation to nf-schema
- Chack whether `--assembly_type` parameter is requiered in nextflow run and update `README.md`
- Update local/unicycler to nf-core/unicycler to Avoid Potential Versioning Issues
- Feature request: allow directory paths for LongFastQ input HOT 2
- Working on updating the nf-core/tools template v2.9 HOT 2
- nf-validation on sample sheet HOT 3
- Released nf-core v2.10 template
- Enhance MultiQC to collect stats from all supported modules
- Removal of Prokka in favor of Bakta HOT 3
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