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Neuro Science's Projects

celegansneuroml icon celegansneuroml

NeuroML based C elegans model, contained in a neuroConstruct project, as well as c302

channelworm icon channelworm

A repository to integrate data, information, scripts, and models of ion channels in C. elegans

neuroarch icon neuroarch

A graph database for fruit fly brain circuits

olfactory-bulb icon olfactory-bulb

A detailed network model of part of the rat olfactory bulb comprising compartmental mitral, granule and PG cells developed by Aditya Gilra and Upinder S. Bhalla (Gilra A, Bhalla US (2015) Bulbar Microcircuit Model Predicts Connectivity and Roles of Interneurons in Odor Coding. PLoS ONE 10(5): e0098045.) The cell morphologies and network connections are in NeuroML v1.8.

petrushin-cluster-analysis icon petrushin-cluster-analysis

Source code for the algorithm described in the paper: "Optimization of an electro-optical representation of the C. elegans connectome through neural network cluster analysis"

pyopenworm icon pyopenworm

Unified, simple data access python library for data & facts about C. elegans anatomy

simple-c-elegans icon simple-c-elegans

Minimalist Python code -- based on OpenWorm and the published literature -- for modeling C. elegans neural network dynamics

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