Related Issues (20)
- Unresolved ids in align_reads_delegate.py
- Try harder to find pypy version number in pypy --version output HOT 1
- make it obvious which log file has the error when dooplicity fails on a step in local/parallel modes HOT 1
- output_dir and mover not defined previously in stream_and_upload HOT 1
- add precision/recall tests to line.py
- error when specifying -r parameter... HOT 5
- Calculate AUC for each sample HOT 2
- Normalize mean consistent with `recount`
- address make_temp_dir(common) in emr_simulator
- Resolve error on NoSuchLifecycleConfiguration HOT 2
- Optionally skip "Copying Rail-RNA and bootstraps to S3..." HOT 1
- Bowtie Indices relative paths not supported HOT 1
- Python subprocess OSError
- Allow --tag specification HOT 1
- Supress intermediary bw option
- Provide rse_gene and rse_exon tables in the rail output
- Stuck at Step 4/24: Align reads and segment them into readlets HOT 4
- release new rail to include update to fastq-dump version
- Error align local mode_exit type 2
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from rail.