Comments (2)
This instance might suffice. I haven't had a chance to look into it. It seems worth investigating.
For MRFy specifically, the running time is so heavily dominated by the Viterbi implementation that I don't think we'd notice any performance issues with the RWS transformers.
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The main thing is to be sure it's lazy enough. An infinite loop would dominate even Viterbi.
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Related Issues (18)
- README file needs to explain how to run benchmarks HOT 1
- Devise a systematic plan for running benchmarks on multiple machines HOT 1
- Diagnose 15% slowdown on ViterbiThree.hs HOT 15
- mrfy-bench should record and emit the GHC version used HOT 2
- Add valgrind support to mrfy-bench HOT 2
- mrfy-bench should record and emit the CPU architecture used HOT 6
- New type for amino acids
- Measure effect of strictness annotations on type Scored
- Confirm there is no slowdown HOT 1
- Get regression tests working
- Get list-based higher-order viterbi working HOT 1
- Arbitrary instances for HMM HOT 1
- Show instances for HMM nodes
- cleaner working HO viterbi HOT 2
- explore the possibility of a Begin node again
- bug in first consistent hoViterbi HOT 1
- get rid of Prob
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