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abar

Automated biomarker analysis in R

ants

Advanced Normalization Tools (ANTs)

antspy

Advanced Normalization Tools in Python

antsrcore

C++ core supporting ANTsR.

atncu

Code for performing plasma biomarker analysis in Cognitively Unimpaired individuals

bctpy

brain connectivity toolbox for python

bctr

Brain Connectivity Toolbox in R

cbdash

Codebase UI components for Shiny

charpente

Seamlessly design robust 'shiny' extensions

deepsccan

Deep & Sparse CCA for Neuroimaging in Tensorflow

dlbs-seg

Brain Image - Tissue Segmentation

docs

fcn_notebooks

Functional Connectivity Notebooks

firebase

Google FIrebase for shiny

fslpy

Python Interface for FSL Neuroimaging Tools

golem

A Framework for Building Robust Shiny Apps

itk

Insight Segmentation and Registration Toolkit -- Mirror

itkr

port of ITK to R

kegg.db

keras

Deep Learning library for Python. Runs on TensorFlow, Theano, or CNTK.

mesh2nifti

Convert a .msh file in the simNIBS format to a .nii.gz file

metanetr

Statistical Analysis and Visualization of Hierarchical Meta-omic Networks

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

mne-sandbox

experimental mne-python code

networkx

Official NetworkX source code repository.

neurocombat

Harmonizing neuroimaging data across scanners and sites

omicsplayground

Visual self-service analytics platform for big omics data.

pybind11

Seamless operability between C++11 and Python

pybn

Bayesian Networks in Python

pygobn

Global Optimization for Bayesian Networks