Comments (2)
Our logic for annotating semantic types looks for a property of the class that contains the semantic type code (T191 in this case). Once found, the value is used to set a custom top-level property of the class called “semanticType”. The value of the “semanticType” property is then used when we process classes for the Annotator repository. Looking at the class you provided, there is no property in the class that references the semantic type code. There is one that states the name of the semantic type, “Neoplastic Process”, but that isn’t sufficient for us to classify this as a class belonging to the T191 semantic type:
Here is a sample of a different class from SNOMEDCT that does set the semantic type property and thus appears in your annotation query (if you remove the NCIT ontology filter):
from ncbo_annotator.
I'm making this a "won't fix", as we are not doing anything wrong per Misha's analysis.
from ncbo_annotator.
Related Issues (17)
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