Related Issues (20)
- Aim 2.3.a. Evaluate extent of expected integration between BioPortal ontologies.
- Omit biolink:OntologyClass when assigning new node category
- ValueError: mapping_justification must be supplied HOT 1
- Transform for `ISSVA` fails HOT 1
- Transform for `RDL` fails HOT 4
- General transformation failures for the July 20 2022 data HOT 3
- HGNC type maps incorrect
- UMLS semantic types not being applied HOT 1
- Some prefixes need updates as of Jul 20 2022 BP dump
- Missing IRIs and metadata from many transforms HOT 7
- Convert prefix conversion to use `curies` package HOT 2
- Fix prefixes for OBO:[external resource] HOT 1
- Collision between ATO and ATOL, potentially others of similar names HOT 1
- Produce stats yaml with status and node/edge count of each ontology source HOT 1
- Find alternate solution to SSSOM maps for adding Biolink categories HOT 1
- Error in relaxing Cell Cycle Ontology, BERO, and PR HOT 5
- validate() got an unexpected keyword argument 'stream'
- UnboundLocalError: local variable 'nodecount' referenced before assignment
- Transform from most recent BioPortal data
- Source metadata is missing in new transforms
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