Comments (4)
This is relevant to and might actually make more sense in: https://github.com/NCATS-Tangerine/beacon-aggregator
from tkbio.
I put together a tentative solution, where before grabbing statements the application grabs exact matches and adds them to the list of curies being used to grab statements.
https://github.com/STARInformatics/tkbio/pull/11/commits/da2406217d72c9c057a8524c9fd9bd03c75b5645
from tkbio.
Even with some initial implementation of the exactmatches functionality inside beacon-aggregator, we still face the task of how to represent equivalent concept cliques in the data table and in the concept map graph. Either we designate one concept (e.g. wikidata record) as "canonical" or somehow manage "equivalent concept cliques" in statements in lieu of the original concepts?
from tkbio.
We have made substantial progress on resolving this issue since it was posted and since further comments were made, so we'll close it for now, but should probably capture the commentary above for further digestion (to see if we got things right)
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Related Issues (20)
- Clicking Concept Map edges don't always bring up a dialog box...
- Equivalent concept nodes not merged in Concept Map HOT 2
- Beacon "Record Logs" button works to bring up a logs page, but the result set is always empty? HOT 3
- Fix metadata display and navigation functions on blackboard nodes (copied over from beacon-aggregator issue #19) HOT 1
- Remove duplicate rows from statement table HOT 2
- Improve filtering functionality in tk.bio interface HOT 3
- Improve pagination functionality in statement table HOT 1
- Fix metadata display and navigation functions on blackboard nodes HOT 2
- Fix direction of relations in statement table and blackboard display HOT 3
- Merge Cliques in "Concept by text" search table HOT 1
- Upgrade to Vaadin 10 to support Web Components HOT 1
- No links from gene to disease (SLC26A3)
- Data counts
- Gradle 4 build fails
- Curie search fails
- Clicking "add to graph" throws null pointer error.
- Concept Clique Display
- Update FAQ to reflect new workflow
- Enter key is always bound to search button
- Latest TKBIO (as of Sept 6, 2018) doesn't properly work?
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