error from qstat in jlab-ch about ncar-python-tutorial HOT 5 CLOSED

On Wed, Jul 17, 2019 at 7:14 AM Matthew Long ***@***.***> wrote: I suspect that the string returned from PBS has changed following machine downtime. It now returns something like $JOBID.chadmin1.ib0.cheyenne.ucar and sjob=${s%.*} is everything before the last ".". I changed this to sjob=${s%%.*} and it works. However, I am not getting another error from Jupyter WARNING: The conda.compat module is deprecated and will be removed in a future release. [I 07:05:11.183 LabApp] [nb_conda_kernels] enabled, 5 kernels found Traceback (most recent call last): File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/traitlets/traitlets.py", line 528, in get value = obj._trait_values[self.name] KeyError: 'runtime_dir' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/glade/work/mclong/miniconda3/bin/jupyter-lab", line 11, in <module> sys.exit(main()) File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/jupyter_core/application.py", line 266, in launch_instance return super(JupyterApp, cls).launch_instance(argv=argv, **kwargs) File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/traitlets/config/application.py", line 657, in launch_instance app.initialize(argv) File "</glade/work/mclong/miniconda3/lib/python3.7/site-packages/decorator.py:decorator-gen-7>", line 2, in initialize File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/traitlets/config/application.py", line 87, in catch_config_error return method(app, *args, **kwargs) File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/notebook/notebookapp.py", line 1628, in initialize self.init_configurables() File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/notebook/notebookapp.py", line 1319, in init_configurables connection_dir=self.runtime_dir, File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/traitlets/traitlets.py", line 556, in __get__ return self.get(obj, cls) File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/traitlets/traitlets.py", line 535, in get value = self._validate(obj, dynamic_default()) File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/jupyter_core/application.py", line 99, in _runtime_dir_default ensure_dir_exists(rd, mode=0o700) File "/glade/work/mclong/miniconda3/lib/python3.7/site-packages/jupyter_core/utils/__init__.py", line 13, in ensure_dir_exists os.makedirs(path, mode=mode) File "/glade/work/mclong/miniconda3/lib/python3.7/os.py", line 211, in makedirs makedirs(head, exist_ok=exist_ok) File "/glade/work/mclong/miniconda3/lib/python3.7/os.py", line 221, in makedirs mkdir(name, mode) PermissionError: [Errno 13] Permission denied: '/run/user/4267' I haven't used this script in a while, since JupyterHub. jlab-dav I use all the time without issue. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#20>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ADWZPO6TFDFZ6BF4L66U6UDP74LKJANCNFSM4IEQCL3Q> .