nathanielmki Goto Github PK

3d-rcan

Three-dimensional residual channel attention networks

accessing_public_genomic_data

Tutorials on accessing public reference and genomic data

asp.net_core

repo to test docker container creation with .net and vscode

awesome-nextflow

A curated list of nextflow based pipelines

benfordparse

Repo for Benford Law parsing

bio-cwl-tools

bioconda-recipes

Conda recipes for the bioconda channel.

bioinfokit

Bioinformatics data analysis and visualization toolkit

bioinformatics_online

Resource list and preparation instructions for online learning and teaching for Bioinformatics

blast_xml_parse

This is a small python script to parse the results of a large BLAST XML file.

composer

Visual and code editor for Common Workflow Language

computer-science

:mortar_board: Path to a free self-taught education in Computer Science!

crisporpaper

Code for the CRISPOR article, all data and code to create figures and analysis

cwl_development

a test repository to explore re-organizing and re-structing biocore_analysis

cwl_tutorial

A brief intro to CWL and its usage, provided by commonwl.org

dactl

Modern, fast and configurable Jekyll theme with some tricks up it's sleeve.

data_tidying_and_visualisation

Workshops on Pandas, data tidying, and visualisation

deeplearning-biology

A list of deep learning implementations in biology

designfilegen

english-persian-word-database

English Persian Word Database - Popular database extensions

equidock_public

EquiDock: geometric deep learning for fast rigid 3D protein-protein docking

files

A modern file explorer that pushes the boundaries of the platform.

genomics-r-intro

Intro to R and RStudio for Genomics

gseapy

Gene Set Enrichment Analysis in Python

gseautomate

Repo to manage automation of GSEA through gseapy software and extensions

guessmylt

An efficient way to guess the library type of your RNA-Seq data.

hisat2

Graph-based alignment (Hierarchical Graph FM index)

homolog_annotation

Given microarray data, formats and annotates homologs

indrops

Pipeline for processing inDrops sequencing data (FORKED FROM ORIGINAL)

intro-to-rnaseq-hpc-salmon