nat2bee Goto Github PK

bivoltine_apidologie

Data from the manuscript: RNA-Seq reveals that mitochondrial genes and long non-coding RNAs may play important roles in the bivoltine generations of the non-social Neotropical bee Tetrapedia diversipes

blast-tools

Tools to work with blast results

cataglyphis_hs

Additional data repository from the manuscript Molecular adaptations to heat stress in the thermophilic ants

cluster-after-cleaning

Scripts used after cleaning the transcriptome from contaminants to find the final number of clusters in each dataset.

ctuberosus

Data repository of the manuscript: Transcriptomic profiling of castes and of sexually and parthenogenetically produced reproductive females in the termite Cavitermes tuberosus

de-analyses

fasta-manipulation

Useful scripts for fasta

foragers_vs_nurses

Data and scripts from the manuscript: Gene expression and epigenetics reveal species-specific mechanisms acting upon common molecular pathways in the evolution of task division in bees

gc_analyses

geneconversion

Scripts for detecting gene conversion events in pedigrees

nat2bee

This is my custom profile showcase for my data science Github.

nat2bee.github.io

Personal webpage

orthology

Scripts to find and manipulate orthologous

repetitive_elements_pipeline

Pipeline to identify repetitive elements on non-model species genomes.

trans-contamination

Scripts used to clean contaminant transcripts from a transcriptome dataset using the annotation data from Annocript and the clusters from Corset.