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30daymakecppserver

30天自制C++服务器，包含教程和源代码

algorithm-visualizer

:fireworks:Interactive Online Platform that Visualizes Algorithms from Code

amplimap

amplicon/smMIP mapping and analysis pipeline

ancestry_pipeline

Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc

assembly-methods-nanopore

Assembly methods for nanopore-based metagenomic sequencing: a comparative study

awesome-spider

爬虫集合

bac-ngs-book

病原微生物高通量测序数据分析笔记

bamdst

a lightweight bam file depth statistical tool

bamsurgeon

tools for adding mutations to existing .bam files, used for testing mutation callers

bash-oneliner

A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.

biocloud

生物信息分析云平台

blacklist

Application for making ENCODE Blacklists

bonito

A PyTorch Basecaller for Oxford Nanopore Reads

causalcall

chiron

A basecaller for Oxford Nanopore Technologies' sequencers

cmaketutorial

CMake中文实战教程

codex2

Full-spectrum copy number variation detection by high-throughput DNA sequencing

condensenetv2

[CVPR 2021] CondenseNet V2: Sparse Feature Reactivation for Deep Networks

cppcoro-vcpkg

A library of C++ coroutine abstractions for the coroutines TS

cs-base

图解计算机网络、操作系统、计算机组成、数据库，共 1000 张图 + 50 万字，破除晦涩难懂的计算机基础知识，让天下没有难懂的八股文！🚀 在线阅读：https://xiaolincoding.com

ctc_beam_search_decoder

Shared library for ctc beam search decoder.

ctc_beam_search_decoder_cpp

ctcbeamsearch

Connectionist Temporal Classification (CTC) decoding algorithms: best path, beam search

cwdtw_nano

Continuous Wavelet Dynamic Time Warping for unbalanced global mapping in nanopore sequencing analysis

cyclomics_consensus_pipeline

Cyclomics consensus pipeline based on LAST and dagcon

d2l-zh

《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被全球175所大学采用教学。

dba_kmeans_knn

the inplement of dtw barycenter averaging with knn and kmeans

deepnano

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

delly

DELLY2: Structural variant discovery by integrated paired-end and split-read analysis