mw201608 Goto Github PK

ad_pan_cortical_transcriptomics

R script for constructing coexpression networks

ad_scrnaseq_companion

advanced-shiny

Shiny tips & tricks for improving your apps and solving common problems

bayesiannetwork

bioconda-recipes

Conda recipes for the bioconda channel.

combat

cpa

The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level. CPA performs OOD predictions of unseen combinations of drugs, learns interpretable embeddings, estimates dose-response curves, and provides uncertainty estimates.

cyjshiny

An R/shiny widget for cytoscape.js

datahub

dqshiny

Enhance Shiny Apps with Customizable Modules

ggplot_tips

gotest

leafcutter

Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard

liftoverplink

A wrapper for liftOver for converting plink genotype data between different genome reference builds

linear_algebra_with_python

Lecture Notes for Linear Algebra Featuring Python

linuxnotes

Linux administration

loan-calculator

matrixeqtl

:exclamation: This is a read-only mirror of the CRAN R package repository. MatrixEQTL — Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations. Homepage: http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/ Report bugs for this package: https://github.com/andreyshabalin/MatrixEQTL/issues

matrixtools

megena

Multiscale embedded gene co-expression network analysis

mnml-public

models

Models and examples built with TensorFlow

msigdb

MSigDB gene sets

ncells

Calculating the number of cells in single cell RNA-seq experiments

netweaver

NetWeaver: Graphic Presentation of Complex Genomic and Network Data Analysis

pd_substantia_nigra

Source code for PD substantia nigra single nucleus RNA-seq data analysis

proverb

Great people wisdom

quickhyper

r-cytoscape.js

An HTMLWidgets package for CytoscapeJS which can be used to produce standalone figure or for embedding in Shiny applications.

rlib