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cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

consensus-decentralization

Tool that analyzes blockchain decentralization on the consensus layer by looking at the block production distributions of various blockchain systems.

demos

Demos for the other repositories

eips

The Ethereum Improvement Proposal repository

fee

Designed an attack for Vitalik's EIP 1559 and proposed an alternative transaction fee pricing protocol based on the Almgren-Chriss framework and median price auctions

incentivus

Redesigned Binance DEX match engine to make it even more autonomous and decentralized by in-protocol mechanisms which reduce the risk of relying on validators to choose the transactions to be included in a block

mtefagh

mtefagh.github.io

optimizer

!Optimizer 2021

qfca

Compressed biological systems of tens of thousands of biochemical reactions by a hierarchical organization of pathways which speeds up the downstream analysis up to 3 times in addition to saving memory and storage space

qfca.jl

A Julia package for Quantitative Flux Coupling Analysis

sparseqfca.jl

Developed a registered Julia package which quantifies the redundancies in genome-scale metabolic networks and provides local sparse certificates which are both efficiently verifiable and interpretable

swiftcore

Accelerated the state-of-the-art in genome-scale metabolic network reconstruction more than 10 times by convex optimization techniques such as factorization, approximation, and regularization