Comments (8)
mrzv
commented on June 18, 2024
Looking at the boost documentation, it appears that emplace_back() was added to that class in 1.55. Whether that's enough, I'm not sure. In any case, this would be too painful to fix, and I don't see much reason to support 4-year old versions of Boost.
from dionysus.
mrzv
commented on June 18, 2024
I just tested with Boost 1.55, and everything compiles. So I guess we can consider that to be the minimum required version.
from dionysus.
cdeepakroy
commented on June 18, 2024
@mrzv Thank you for the reply. I just tried to build it against boost 1.65 and i get the following error:
Scanning dependencies of target zigzag-filtration-persistence
[ 2%] Building CXX object examples/filtration/CMakeFiles/zigzag-filtration-persistence.dir/zigzag-filtration-persistence.cpp.o
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:182:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp: In instantiation of ‘dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]’:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.hpp:11:53: required from ‘dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::add_impl(const ChainRange&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index = int]’
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:50:39: required from ‘dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::add(const ChainRange&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index = int]’
/home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:42:114: required from here
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: error: no matching function for call to ‘dionysus::Reduction<std::tuple<int, int> >::reduce(dionysus::SparseRowMatrix<dionysus::ZpField<>, int, std::less<int>, std::vector>::Column&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda3&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda4&, dionysus::SparseRowMatrix<dionysus::ZpField<>, int, std::less<int>, std::vector>::Field&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda5&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda2&)’
field_, addto, row_cmp);
^
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: note: candidates are:
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:12:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:40:11: note: template<class Chain1, class ChainsLookup, class LowLookup, class Field, class Comparison> static dionysus::Reduction<Index_>::Index dionysus::Reduction<Index_>::reduce(Chain1&, const ChainsLookup&, const LowLookup&, const Field&, dionysus::Reduction<Index_>::AddtoVisitor<Field>&, const Comparison&) [with Chain1 = Chain1; ChainsLookup = ChainsLookup; LowLookup = LowLookup; Field = Field; Comparison = Comparison; Index_ = std::tuple<int, int>]
Index reduce(Chain1& c,
^
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:40:11: note: template argument deduction/substitution failed:
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:182:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: note: ‘dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda5’ is not derived from ‘dionysus::Reduction<std::tuple<int, int> >::AddtoVisitor<Field>’
field_, addto, row_cmp);
^
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:12:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:76:11: note: template<class Chain1, class Chain2, class Field, class Comparison> static dionysus::Reduction<Index_>::Index dionysus::Reduction<Index_>::reduce(Chain1&, const std::vector<Chain2>&, const std::vector<_RealType>&, const Field&, dionysus::Reduction<Index_>::AddtoVisitor<Field>&, const Comparison&) [with Chain1 = Chain1; Chain2 = Chain2; Field = Field; Comparison = Comparison; Index_ = std::tuple<int, int>]
Index reduce(Chain1& c,
^
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:76:11: note: template argument deduction/substitution failed:
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:182:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: note: ‘dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::vector; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::vector<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda3’ is not derived from ‘const std::vector<Chain2, std::allocator<_T2> >’
field_, addto, row_cmp);
^
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp: In instantiation of ‘dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]’:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.hpp:15:58: required from ‘dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::add_impl(const ChainRange&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index = int]’
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:50:39: required from ‘dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::add(const ChainRange&) [with ChainRange = boost::range_detail::transformed_range<main()::__lambda17, const boost::iterator_range<dionysus::Simplex<>::BoundaryChainIterator<dionysus::ZpField<> > > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; dionysus::ZigzagPersistence<Field_, Index_, Comparison_>::Index = int]’
/home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:42:114: required from here
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: error: no matching function for call to ‘dionysus::Reduction<std::tuple<int, int> >::reduce(dionysus::SparseRowMatrix<dionysus::ZpField<>, int, std::less<int>, std::deque>::Column&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda3&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda4&, dionysus::SparseRowMatrix<dionysus::ZpField<>, int, std::less<int>, std::deque>::Field&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda5&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda2&)’
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: note: candidates are:
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:12:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:40:11: note: template<class Chain1, class ChainsLookup, class LowLookup, class Field, class Comparison> static dionysus::Reduction<Index_>::Index dionysus::Reduction<Index_>::reduce(Chain1&, const ChainsLookup&, const LowLookup&, const Field&, dionysus::Reduction<Index_>::AddtoVisitor<Field>&, const Comparison&) [with Chain1 = Chain1; ChainsLookup = ChainsLookup; LowLookup = LowLookup; Field = Field; Comparison = Comparison; Index_ = std::tuple<int, int>]
Index reduce(Chain1& c,
^
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:40:11: note: template argument deduction/substitution failed:
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:182:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: note: ‘dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda5’ is not derived from ‘dionysus::Reduction<std::tuple<int, int> >::AddtoVisitor<Field>’
field_, addto, row_cmp);
^
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:12:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:76:11: note: template<class Chain1, class Chain2, class Field, class Comparison> static dionysus::Reduction<Index_>::Index dionysus::Reduction<Index_>::reduce(Chain1&, const std::vector<Chain2>&, const std::vector<_RealType>&, const Field&, dionysus::Reduction<Index_>::AddtoVisitor<Field>&, const Comparison&) [with Chain1 = Chain1; Chain2 = Chain2; Field = Field; Comparison = Comparison; Index_ = std::tuple<int, int>]
Index reduce(Chain1& c,
^
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/reduction.h:76:11: note: template argument deduction/substitution failed:
In file included from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.h:182:0,
from /home/cdeepakroy/work/Libs/dionysus/include/dionysus/zigzag-persistence.h:9,
from /home/cdeepakroy/work/Libs/dionysus/examples/filtration/zigzag-filtration-persistence.cpp:11:
/home/cdeepakroy/work/Libs/dionysus/include/dionysus/sparse-row-matrix.hpp:45:47: note: ‘dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::reduce(const ChainRange&, dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain&) [with ChainRange = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >; Field_ = dionysus::ZpField<>; Index_ = int; Comparison_ = std::less<int>; Column_ = std::deque; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::Column = std::deque<dionysus::detail::SparseRowMatrixEntry<dionysus::ZpField<>, int> >; dionysus::SparseRowMatrix<Field_, Index_, Comparison_, Column_>::IndexChain = std::vector<dionysus::ChainEntry<dionysus::ZpField<>, int>, std::allocator<dionysus::ChainEntry<dionysus::ZpField<>, int> > >]::__lambda3’ is not derived from ‘const std::vector<Chain2, std::allocator<_T2> >’
field_, addto, row_cmp);
^
make[2]: *** [examples/filtration/CMakeFiles/zigzag-filtration-persistence.dir/zigzag-filtration-persistence.cpp.o] Error 1
make[1]: *** [examples/filtration/CMakeFiles/zigzag-filtration-persistence.dir/all] Error 2
make: *** [all] Error 2
from dionysus.
mrzv
commented on June 18, 2024
What compiler are you using?
from dionysus.
cdeepakroy
commented on June 18, 2024
It is using g++ version 4.8.4
Below is the output of the cmake command
cmake -D PYTHON_EXECUTABLE=~/anaconda/bin/python2.7 ../
-- The C compiler identification is GNU 4.8.4
-- The CXX compiler identification is GNU 4.8.4
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Boost version: 1.65.0
-- Boost version: 1.65.0
-- Found PythonInterp: /home/cdeepakroy/anaconda/bin/python2.7 (found version "2.7.13")
-- Found PythonLibs: /home/cdeepakroy/anaconda/lib/libpython2.7.so
-- pybind11 v2.1.1
-- Performing Test HAS_CPP14_FLAG
-- Performing Test HAS_CPP14_FLAG - Failed
-- Performing Test HAS_CPP11_FLAG
-- Performing Test HAS_CPP11_FLAG - Success
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
-- LTO enabled
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cdeepakroy/work/Libs/dionysus/build
The CXX compiler /usr/bin/c++ it detects is symlinked to /usr/bin/g++
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mrzv
commented on June 18, 2024
That's an old compiler. Is there no way to use something more recent? In another issue, somebody successfully compiled the code with GCC 5.4, which is also old, but not quite as old.
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cdeepakroy
commented on June 18, 2024
I rebuilt with version 5.4.1 and it works! Thanks for all the help!
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mrzv
commented on June 18, 2024
Glad to hear it! And thanks for understanding: it would be too much effort to support very old compilers and libraries.
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Related Issues (20)
- Get the type (open, closed, half-open) of the bars in zigzag persistence
- Installation failed on Windows 10 HOT 1
- Cannot Load submodules in python HOT 6
- Trivial cycles HOT 4
- Incorrect Homologies with Lower-star filtration HOT 8
- Vines question HOT 8
- Plotting fails on diagram with no finite points
- cycle position HOT 8
- fill_rips() works strange when using condensed distance matrices HOT 6
- cmake does not create makefile HOT 3
- cmake doesn't install C++ headers and python binding files
- issue with installing on windows HOT 2
- Saving output of filtration and reuploading to compute cohomology HOT 1
- Make fails: HOT 1
- Dionysus does not installs into NVIDIA-supplied containers HOT 2
- ERROR: Could not build wheels for dionysus, which is required to install pyproject.toml-based projects HOT 4
- Representative cycles in zigzag persistence homology for all cycles HOT 6
- clang-18 fails to compile dionysus: error: non-constant-expression cannot be narrowed from type 'size_t' (aka 'unsigned long') to 'Index' (aka 'unsigned int') in initializer list HOT 1
- test_issue47.py::test_issue47 fails: HOT 3
- python bindings for ZigzagPersistence aren't letting me add to the persistence class HOT 1
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