Comments (2)
/bin/sh: fastANI: command not found
The above error message means that fastANI has not been successfully installed in your environment.
Did you install ANIclustermap with the following command? If so, fastANI should be installed together with it.
conda install -c bioconda -c conda-forge aniclustermap
If ANIclustermap is installed with the above command and it does not work properly, please check if fastANI can be installed properly once with the following command.
# Install fastANI
conda install -c bioconda fastani
# Check fastANI installation
fastANI -h
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Thank you very much! Now it works fine!
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Related Issues (11)
- Improve HeatMap Color Range to Taxonomy HOT 1
- /bin/sh: fastANI: command not found HOT 1
- dyld: Library not loaded HOT 2
- [Question] Visulize existing fastANI output HOT 1
- Input file - similarity matrix HOT 1
- ERROR: Number of input genome fasta file is less than 1. HOT 2
- Not loading my genome HOT 6
- Weird file name behaviour HOT 9
- Could you provide information on how you would like this program to be cited HOT 2
- Genome number limitations? HOT 4
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