Related Issues (20)
- Extensive memory usage for fill box
- CI failing
- New treelib (1.7) mess up the print_hierarchy output
- `Compound.add` scale quite badly with big list
- combining rule not read from xml file when saving a .top file HOT 4
- Cannot commit to Build instance HOT 1
- Ability to change bead size in visualization
- Issue with mbuild docs HOT 2
- Performance loading from `.json` file
- Take into the forming of double bonds in Polymer builder
- Documentation defines build.format.charmm_writer which does not exist HOT 2
- Ability for Polymer Builder to connect ends for a loop
- Loss of meaningful port names and labels
- Error when Compiling Docs Locally HOT 2
- Plugins error when creating anaconda environment with python 3.12 HOT 7
- CI failing for Windowns build HOT 1
- Floating point error converting .gro to .xyz HOT 1
- add variable in the box packing functions to allow more packmol iterations HOT 3
- Add Ruff to pre-commit
- `mb.Compound.save()` feature returns a PDB file without bonds HOT 1
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