MOLGENIS - open source solutions for scientific data's Projects
This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing reveals widespread personalized, context-specific gene expression regulation in immune cells” paper (https://doi.org/10.1038/s41467-022-30893-5)
Array Genotyping Conversion Tool
Prediction of quality metrics to annotate low quality results
Ansible playbook for MOLGENIS
Automated PGx pipeline
Babel plugin for removing `Vue.extend` from components
A suite for benchmarking bioinformatics tools.
Repository for resource files for CAPICE and updating CAPICE model
Collection of utilities / helper scripts to make life easier on our HPC clusters.
Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV) detection in high coverage next-generation sequencing (NGS) data
Interactive web-based genome browser.
Utilities for deploy admins
Dockerfiles and docker-compose for MOLGENIS
Upload tools for DataSHIELD backends
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
FAIR schemas to enable and encourage data interoperability across systems
Integrated Components POC Molgenis