mobidic Goto Github PK

achabilarity

Achab In Singularity, a Singularity Container for Captain Achab (annotation workflow)

adddb_updater

Script to update external cross reference database into a single file

autoachab

script to automatically launch captainAchab MobiDL WDL workflow

barmen

BenchmARking from Mobidic for Exome sequencing at Nucleotide scale

captain-achab

Analysis Converter for Human who might Abhor Bioinformatics. A simple and useful interface to analysis of WES data for molecular diagnosis

crom-wellwrapped

Wrapper for Cromwell execution

dev-singularity

Repo for singularity development and test

knotannotsv

A simple script to create a customizable html file from an AnnotSV output.

mdapi

RESTful API for MobiDetails - deprecated - see MDUtils repo

mobibedannotator

This script will annotate a BED file with refSeq NM and exons positions

mobicnv

CNV analysis based on the depth of coverage of Illumina data

mobidicweb

web site for mobidic group

mobidl

MobidicWDL workflows

mobidl-dev

Developement of new pipeline from MobiDL

molludic

CNV pipeline for MobiDL and Achab

mpa

MoBiDiC Priorization Algorithm

mpaweb

Website for MPA

nenufaar

DNA NGS pipeline

nenufaarityweb

oneliners

Useful bash one-liners for bioinformatics.

ovirt_api_scripts

python script to manage oVirt from the API

phenolyzer

phenotype-based prioritization of candidate genes for human diseases

seal

SEAL db - Simple, Efficient And Lite database for NGS

spliceai

REST API for spliceai

update_annovar_db

scripts to automatically update ANNOVAR db

variant-callerwrapped

Wrapper for Variant-Caller execution